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PKNCA - Perform Pharmacokinetic Non-Compartmental Analysis

Compute standard Non-Compartmental Analysis (NCA) parameters for typical pharmacokinetic analyses and summarize them.

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ncanoncompartmental-analysispharmacokinetics

13.67 score 84 stars 3 dependents 1.0k scripts 2.6k downloads

ggtibble - Create Tibbles and Lists of 'ggplot' Figures for Reporting

Create tibbles and lists of 'ggplot' figures that can be modified as easily as regular 'ggplot' figures. Typical use cases are for creating reports or web pages where many figures are needed with different data and similar formatting.

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4.64 score 4 stars 11 scripts 658 downloads

meddra.read - Load and Use 'MedDRA' Data for Clinical Trials

'MedDRA' data is used for defining adverse events in clinical studies. You can load and merge the data for use in categorizing the adverse events using this package. The package requires the data licensed from 'MedDRA' <https://www.meddra.org/>.

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4.60 score 2 stars 4 scripts 204 downloads

thinr - Binary Image Thinning Algorithms

Thinning (skeletonization) algorithms for binary raster images. Provides seven algorithms behind a single dispatching function: Zhang-Suen (Zhang and Suen 1984) <doi:10.1145/357994.358023>, Guo-Hall (Guo and Hall 1989) <doi:10.1145/62065.62074>, a 2-D adaptation of Lee (Lee, Kashyap, and Chu 1994) <doi:10.1006/cgip.1994.1042>, K3M (Saeed, Tabedzki, Rybnik, and Adamski 2010) <doi:10.2478/v10006-010-0024-4>, the parallel form commonly attributed to Hilditch (1969, in 'Machine Intelligence 4'), OPTA / SPTA (Naccache and Shinghal 1984), and Holt and colleagues (1987) <doi:10.1145/12527.12531>. Also provides the medial axis transform (Blum 1967) and a distance transform implementation following Felzenszwalb and Huttenlocher (2012) <doi:10.4086/toc.2012.v008a019>. The drop-in thinImage() matches the signature of thinImage() in the 'EBImage' package on Bioconductor so existing code can switch parsers without changes. The wider thin() API selects the algorithm by name.

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cpp

4.30 score 481 downloads

tabtibble - Simplify Reporting Many Tables

Simplify reporting many tables by creating tibbles of tables. With 'tabtibble', a tibble of tables is created with captions and automatic printing using knit_print().

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reportingtables

4.18 score 3 stars 4 scripts 209 downloads

hidradenitis - Calculate Clinical Scores for Hidradenitis Suppurativa (HS), a Dermatologic Disease

Calculate clinical scores for hidradenitis suppurativa (HS), a dermatologic disease. The scores are typically used for evaluation of efficacy in clinical trials. The scores are not commonly used in clinical practice. The specific scores implemented are Hidradenitis Suppurativa Clinical Response (HiSCR) (Kimball, et al. (2015) <doi:10.1111/jdv.13216>), Hidradenitis Suppurativa Area and Severity Index Revised (HASI-R) (Goldfarb, et al. (2020) <doi:10.1111/bjd.19565>), hidradenitis suppurativa Physician Global Assessment (HS PGA) (Marzano, et al. (2020) <doi:10.1111/jdv.16328>), and the International Hidradenitis Suppurativa Severity Score System (IHS4) (Zouboulis, et al. (2017) <doi:10.1111/bjd.15748>).

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3.00 score 1 stars 2 scripts 152 downloads

formulops - Mathematical Operations on R Formula

Perform mathematical operations on R formula (add, subtract, multiply, etc.) and substitute parts of formula.

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2.70 score 1 stars 2 scripts 216 downloads